PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.010G100300.1
Common NamePHAVU_010G100300g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family MYB_related
Protein Properties Length: 568aa    MW: 63318.9 Da    PI: 5.2926
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.010G100300.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.4e-08455504147
                         TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
     Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                         r+ WT+eE+ ++ d+v+  ++      W+ I r ++  +++++++s+++++
  Phvul.010G100300.1 455 RLMWTKEEERKFEDVVRSNPPSpekyFWDYIFRAFP-DKSREDLVSYYFNV 504
                         678*****************88**************.***********996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011892.0E-4359409IPR000949ELM2 domain
CDDcd001673.18E-4458505No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    Send to blast
MGVSVGSSVE LLYSRYLSAL DSWMKKIAES KVSPEFGVVD NRDKFGRRLM ELQAEVEGLL  60
SGCAEDGVVV AGEDDHKFDG REFCGANGVK GNGDEGGEHR ECSDSELPDH DMNEAVLGNS  120
GKGNDAMGWQ GGFHGGKMSE EQAVDVMDGA NNSGAGLVSG GTKGGDSDDK GLVLDASGGN  180
SDGDSSGHKR KREGSVLDSS SDDSDSPSRK RMREPAMEML SWVTGVAKNP SDPEVGSIPE  240
KSKWKSYSSQ EVWKQVLFFR EAVFYRRGAE PSTEQRNWQN QKMHPCLYED QVGTNYNLRD  300
RLKCDKKLLF GKYTSVRSSS DSSLETENRT PSPRTEGQSE LFDSSDAHSG LDKWGTVRIP  360
LGANHQAEIP KWTGVTFESD SKWLGTRIWP QEAVNTRLIE RDPIGKGRQG SCGCSEEGSV  420
ECVRFHISEK RAKVQLELGK AFYDWNFDRV GEEVRLMWTK EEERKFEDVV RSNPPSPEKY  480
FWDYIFRAFP DKSREDLVSY YFNVFMLQRR GYQNRHTPDD IDSDDNDEEA GPLRNVFGHQ  540
IKNSGHQMQS SRGSILLTPK KSHKKGK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150420.0AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007135094.10.0hypothetical protein PHAVU_010G100300g
TrEMBLV7AR420.0V7AR42_PHAVU; Uncharacterized protein
STRINGGLYMA07G07525.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF43731724